BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C07SP1|AL426005
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig146 993 0.0
>3x_Contig146
Length = 1181
Score = 993 bits (499), Expect = 0.0
Identities = 524/533 (98%), Gaps = 2/533 (0%)
Strand = Plus / Minus
Query: 6 atcttccaagttgtgga-caaccaatggaaacaacaattgctaggcaagagaagacgttc 64
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 551 atcttccaagttgtggaacaaccaatggaaacaacaattgcaaggcaagagaagacgttc 492
Query: 65 aaatgttgatgctgttgatgctgcctcagctgcctcagcttcagataccgaatctgcaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaatgttgatgctgttgatgctgcctcagctgcctcagcttcagataccgaatctgcaac 432
Query: 125 aacaacgactacagcaactgctgctactggatatgtgatctcgatgagaagctgtgtttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aacaacgactacagcaactgctgctactggatatgtgatctcgatgagaagctgtgtttg 372
Query: 185 tttaaacaacatggcatcgatattgaacatgattgatgaagtagagaaaagtttccaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tttaaacaacatggcatcgatattgaacatgattgatgaagtagagaaaagtttccaatt 312
Query: 245 aaaccaattgagtgaagaagtacgtgctcacgtgaccgacgacaacaataagadaatcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 aaaccaattgagtgaagaagtacgtgctcacgtgaccgacgacaacaataagaaaatcaa 252
Query: 305 atcggagattaagggccaattgtggtcaatagttccgatagccgccgaa-gtgctcyttg 363
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 251 atcggagattaagggccaattgtggtcaatagttccgatagccgccgaaggtgctccttg 192
Query: 364 cgtcggcggaaaggataaccagagccccagatacagtttgtcaattgtcgacacggccaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cgtcggcggaaaggataaccagagccccagatacagtttgtcaattgtcgacacggccaa 132
Query: 424 gcggcatgagatatacaggrcgctagttggcggctttcccgaatggtgggaagatgaggg 483
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcggcatgagatatacaggacgctagttggcggctttcccgaatggtgggaagatgagga 72
Query: 484 gctagatttagaactggaacctcaggraagawtgtccttgtcacttgttttat 536
|||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 71 gctagatttagaactggaacctcaggaaagaatgtccttgtcacttgttttat 19
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4584
Number of Sequences: 1807
Number of extensions: 4584
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)